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Calabi-Yau-Period-Geometry/sage/period_computation.sage
T

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Python

import logging
from sage.all import sage_eval, PolynomialRing, QQ, SR, log, var
load("sage/util.py")
# Logger
logger = logging.getLogger(__name__)
logging.basicConfig(level=logging.DEBUG)
class PFOperator:
"""
A class representing a Picard-Fuchs operator in a single variable z.
Independent of the given order, the variables are assumed to be left of
the derivatives.
The variables extra_locals are needed for symbolic coefficients used for
operator Ansätze.
"""
def _operator_from_string(self, operator_string: str, extra_locals: dict = None):
z_names = ['z%d' % i for i in range(self.no_variables)]
theta_names = ['theta%d' % i for i in range(self.no_variables)]
base_ring = SR if extra_locals else QQ
self.ring = PolynomialRing(base_ring, z_names + theta_names)
self.z_gens = self.ring.gens()[:self.no_variables]
self.theta_gens = self.ring.gens()[self.no_variables:]
parse_locals = dict(self.ring.gens_dict())
if extra_locals:
parse_locals.update(extra_locals)
try:
operator = sage_eval(operator_string, locals=parse_locals)
return operator
except Exception as e:
raise ValueError("Invalid operator string: %s" % e)
def __init__(self, operator_string: str, no_variables: int = 1, extra_locals: dict = None):
self.no_variables = no_variables
self.operator_string = operator_string
self.operator = self._operator_from_string(operator_string, extra_locals=extra_locals)
logger.info("Initialised PFOperator: %s", self.operator)
class PFOperatorAnsatz(PFOperator):
"""
A class for Picard-Fuchs operator Ansätze, characterised by number of variables and their z- and theta-multi-degrees.
"""
def __init__(self, no_variables: int, theta_degree: int, z_degree: int):
self.no_variables = no_variables
self.theta_degree = theta_degree
self.z_degree = z_degree
z_indices = _multi_indices(self.no_variables, z_degree)
theta_indices = _multi_indices(self.no_variables, theta_degree)
# Every (z_index, theta_index) pair allowed by the degree bounds gets its own
# fresh unknown, to be solved for once the Ansatz is applied to a period.
operator_terms = [
(var("b_" + "_".join(str(x) for x in z_index + theta_index)), (z_index, theta_index))
for z_index in z_indices
for theta_index in theta_indices
]
def _monomial_factors(index, name):
return [f"{name}{i}^{exp}" for i, exp in enumerate(index) if exp > 0]
operator_string = " + ".join(
"*".join([str(coeff), *_monomial_factors(z_index, "z"), *_monomial_factors(theta_index, "theta")])
for coeff, (z_index, theta_index) in operator_terms
)
extra_locals = {str(coeff): coeff for coeff, _ in operator_terms}
super().__init__(operator_string=operator_string, no_variables=no_variables, extra_locals=extra_locals)
class Period:
"""
A class representing a period as a formal power series in z-variables and their logs.
The coefficients are stored in a dictionary of dictionaries, where the first key is the multi-index
of the logarithmic part and the second key is the multi-index of the z-variables.
So, for example, the coefficient of
log(z0)^2 * log(z1) * z0^3 * z1^2 would be stored as coefficients[(2, 1)][(3, 2)]
"""
def _initialise_ring(self):
z_names = ['z%d' % i for i in range(self.no_variables)]
log_names = ['L%d' % i for i in range(self.no_variables)]
ring = PolynomialRing(QQ, z_names + log_names)
z_gens = ring.gens()[:self.no_variables]
log_gens = ring.gens()[self.no_variables:]
return ring, z_gens, log_gens # type: (PolynomialRing, list, list)
def _period_from_string(self, period_string: str) -> dict:
ring, z_gens, log_gens = self._initialise_ring()
log_of_z = dict(zip(z_gens, log_gens))
def log(zi):
try:
return log_of_z[zi]
except (KeyError, TypeError):
raise ValueError(
"log(...) may only be applied to one of the z-variables z0, ..., z%d"
% (self.no_variables - 1)
)
parse_locals = dict(ring.gens_dict())
parse_locals['log'] = log
try:
expression = ring(sage_eval(period_string, locals=parse_locals))
except Exception as e:
raise ValueError("Invalid period string: %s" % e)
coefficients = {}
for coeff, monomial in expression:
exponents = monomial.exponents()[0]
z_index = tuple(exponents[:self.no_variables])
log_index = tuple(exponents[self.no_variables:])
coefficients.setdefault(log_index, {})[z_index] = coeff
return coefficients
def _period_to_string(self) -> str:
ring, z_gens, log_gens = self._initialise_ring()
expression = ring(0)
for log_index, z_dict in self.coefficients.items():
for z_index, coeff in z_dict.items():
monomial = coeff
for i in range(self.no_variables):
monomial *= (log_gens[i] ** log_index[i]) * (z_gens[i] ** z_index[i])
expression += monomial
log_substitutions = {log_gens[i]: log(SR(z_gens[i])) for i in range(self.no_variables)}
return str(SR(expression).subs(log_substitutions))
def _max_z_degree(self) -> int:
# Highest total z-degree (sum of the z-multi-index) among all coefficients.
if not self.coefficients:
return 0
return max(
sum(z_index)
for z_dict in self.coefficients.values()
for z_index in z_dict
)
def _truncate_coefficients(self, order: int) -> dict:
# Drop every (log_index, z_index) entry whose total z-degree exceeds order,
# removing it from the dictionary rather than merely zeroing it out.
truncated = {}
for log_index, z_dict in self.coefficients.items():
kept = {z_index: coeff for z_index, coeff in z_dict.items() if sum(z_index) <= order}
if kept:
truncated[log_index] = kept
return truncated
def _apply_theta(self, coefficients: dict, index: int) -> dict:
"""
Applies the logarithmic derivative theta_i = z_i * d/dz_i once to a coefficients dict of the same
shape as self.coefficients. It uses the product rule
theta_i(z^a log(z)^k) = a_i * z^a log(z)^k + k_i * z^a log(z)^(k - e_i).
"""
result = {}
for log_index, z_dict in coefficients.items():
for z_index, coeff in z_dict.items():
a_i = z_index[index]
if a_i != 0:
inner = result.setdefault(log_index, {})
inner[z_index] = inner.get(z_index, 0) + a_i * coeff
k_i = log_index[index]
if k_i != 0:
lowered_log_index = log_index[:index] + (k_i - 1,) + log_index[index + 1:]
inner = result.setdefault(lowered_log_index, {})
inner[z_index] = inner.get(z_index, 0) + k_i * coeff
return result
def apply_operator(self, pf_operator: PFOperator) -> "Period":
"""
Applies a PFOperator to this period and returns the result as a new Period,
truncated to self.order. Each monomial of the operator is normalised as
coeff * z^p * theta^q (see PFOperator's docstring), so theta^q is applied
to the period first and the result is then multiplied by coeff * z^p.
"""
if pf_operator.no_variables != self.no_variables:
raise ValueError(
"Variable count mismatch: period has %d variable(s), operator has %d."
% (self.no_variables, pf_operator.no_variables)
)
result_coefficients = {}
for monomial_coeff, monomial in pf_operator.operator:
exponents = monomial.exponents()[0]
z_exponents = exponents[:self.no_variables]
theta_exponents = exponents[self.no_variables:]
term = self.coefficients
for i, power in enumerate(theta_exponents):
for _ in range(power):
term = self._apply_theta(term, i)
for log_index, z_dict in term.items():
inner = result_coefficients.setdefault(log_index, {})
for z_index, coeff in z_dict.items():
shifted_z_index = tuple(z_index[i] + z_exponents[i] for i in range(self.no_variables))
inner[shifted_z_index] = inner.get(shifted_z_index, 0) + monomial_coeff * coeff
result_coefficients = {
log_index: {z_index: c for z_index, c in z_dict.items() if c != 0}
for log_index, z_dict in result_coefficients.items()
}
result_coefficients = {log_index: z_dict for log_index, z_dict in result_coefficients.items() if z_dict}
return Period(
no_variables=self.no_variables,
coefficients=result_coefficients,
order=self.order,
)
def __init__(self, no_variables: int = 1, coefficients: dict = None, period_string: str = None, order: int = None):
self.no_variables = no_variables
# Use coefficients or period_string to initialize the period
if period_string is not None:
if coefficients is not None:
raise ValueError("Provide either coefficients or period_string, not both.")
self.coefficients = self._period_from_string(period_string)
self.period_string = period_string
logger.debug("Using string for initialisation.")
elif coefficients is None:
self.coefficients = {}
else:
self.coefficients = coefficients
self.period_string = self._period_to_string()
logger.debug("Using coefficients for initialisation.")
if order is None:
self.order = self._max_z_degree()
logger.debug("Order not provided, using maximum z-degree: %d", self.order)
else:
self.coefficients = self._truncate_coefficients(order)
self.order = order
self.period_string = self._period_to_string()
logger.debug("Truncated coefficients to order %d.", self.order)
logger.info("Initialised Period in %d variables at order %d.", self.no_variables, self.order)
class PeriodAnsatz(Period):
"""
A class for period Ansätze, characterised by number of variables and their z- and log-multi-degrees.
"""
def __init__(self, no_variables: int, z_degree: int, log_degree: int):
self.no_variables = no_variables
self.z_degree = z_degree
self.log_degree = log_degree
log_indices = _multi_indices(self.no_variables, log_degree)
z_indices = _multi_indices(self.no_variables, z_degree)
# Every (log_index, z_index) pair allowed by the degree bounds gets its own
# fresh unknown, to be solved for once a PFOperator is applied to the Ansatz.
coefficients = {
log_index: {
z_index: var("a_" + "_".join(str(x) for x in log_index + z_index))
for z_index in z_indices
}
for log_index in log_indices
}
super().__init__(no_variables=no_variables, coefficients=coefficients, order=z_degree)
self.expansion_coefficients = self.coefficients
logger.info(
"Initialised PeriodAnsatz with %d unknown coefficient(s).",
sum(len(z_dict) for z_dict in self.expansion_coefficients.values()),
)
"""
To do:
- add method to Period that finds operators that annihilate it (using operator ansatz class)
- add class PFideal containing a list of PFOperators
"""